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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1607802_1608541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1607802 - 1608541

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TTGAAAGTAATT

Flanking Amino Acid:

KLCHMYYNWSGVIRVPAPCQ

Intron Amino Acid Position:

830

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

91.2

27.5

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

77.7

0.62

0.7

71.8

26.3

Minor 5ss

42.1

-0.9

2.9

61.3

Minor BPS

-0.3

2.3

66.84

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031579

1588541 - 1608658

20118

ENSAPLT00000012861

1588541 - 1608658

20118