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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1613933_1614517_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1613933 - 1614517

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGGAAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATTT

Flanking Amino Acid:

DTPMRTKAKRKKSVHFTP*

Intron Amino Acid Position:

1369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.3

39.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

59.7

0.22

1.1

54.3

Minor 5ss

39.2

-1.2

2.8

43.8

Minor BPS

60.2

0.4

1.5

74.31

37.1

Associated Gene:

Gene:

RIMBP2

Ensembl Gene ID:

ENSAPLG00000012892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025366

1613886 - 1666112

52227