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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1617820_1619196_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1617820 - 1619196

Intron Length:

1377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGTGCT

5'SS Class:

major

3'SS Sequence:

GTGATTGGAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GTGATTGGAACA

Flanking Amino Acid:

VHRRSRKSKRERNRRSGRQP

Intron Amino Acid Position:

1364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.3

71.5

38.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

55.8

0.13

1.2

50.3

Minor 5ss

36.8

-1.5

3.1

50.8

45.6

Minor BPS

43.1

-0.5

52.91

39.4

Associated Gene:

Gene:

RIMBP2

Ensembl Gene ID:

ENSAPLG00000012892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027380

1611961 - 1676958

64998

ENSAPLT00000027396

1611961 - 1680878

68918