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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1619263_1621343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1619263 - 1621343

Intron Length:

2081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCCTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTTCTTTTATT

Flanking Amino Acid:

LPLNTPVEKIVNCDRFKEST

Intron Amino Acid Position:

1342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

73.9

0.54

75.3

27.3

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

69.5

0.7

1.6

83.31

38.3

Associated Gene:

Gene:

RIMBP2

Ensembl Gene ID:

ENSAPLG00000012892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027396

1611961 - 1680878

68918

ENSAPLT00000027380

1611961 - 1676958

64998