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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1630459_1635394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1630459 - 1635394

Intron Length:

4936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

TGTAACTTACAA

Flanking Amino Acid:

VSVTSHNALKLLGNPSSAGR

Intron Amino Acid Position:

1128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.8

38.5

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

82.9

0.74

0.8

81.2

36.5

Minor 5ss

-0.8

2.9

56.9

47.4

Minor BPS

48.6

-0.1

1.9

63.65

41.8

Associated Gene:

Gene:

RIMBP2

Ensembl Gene ID:

ENSAPLG00000012892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034469

1611961 - 1768405

156445

ENSAPLT00000018347

1611961 - 1768405

156445