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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1661891_1665337_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1661891 - 1665337

Intron Length:

3447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTAAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TTTTCTTTAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

74.2

36.3

Major BPS

0.7

0.9

79.6

29.1

Major PPT

73.8

0.53

70.9

37.7

Minor 5ss

34.6

-1.8

2.9

44.3

43.4

Minor BPS

82.7

1.02

1.1

88.66

27.6

Associated Gene:

Gene:

RIMBP2

Ensembl Gene ID:

ENSAPLG00000012892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025366

1613886 - 1666112

52227

ENSAPLT00000030488

1611961 - 1666112

54152