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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1673409_1680669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1673409 - 1680669

Intron Length:

7261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TGGCCTATAACA

Flanking Amino Acid:

MQLIYKKNELKDDVQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

73.5

37.1

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

76.6

0.6

0.9

Minor 5ss

33.7

-1.9

3.2

47.5

Minor BPS

57.1

0.22

1.6

66.71

39.4

Associated Gene:

Gene:

RIMBP2

Ensembl Gene ID:

ENSAPLG00000012892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027396

1611961 - 1680878

68918