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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1673409_1752838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1673409 - 1752838

Intron Length:

79430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TGGCCTATAACA

Flanking Amino Acid:

GSVCVLAASKKNELKDDVQE

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

26.6

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

76.6

0.6

0.9

Minor 5ss

-1.6

2.8

44.6

43.4

Minor BPS

57.1

0.22

1.6

66.71

39.4

Associated Gene:

Gene:

RIMBP2

Ensembl Gene ID:

ENSAPLG00000012892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034469

1611961 - 1768405

156445