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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1773293_1774674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1773293 - 1774674

Intron Length:

1382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTTCTTTAACA

Flanking Amino Acid:

MDMAMFVETQGEMINNIEKN

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

76.5

34.2

Major BPS

78.6

0.71

79.6

32.9

Major PPT

69.8

0.45

1.1

72.4

36.4

Minor 5ss

-1.3

48.1

47.6

Minor BPS

92.1

1.32

0.7

95.26

19.9

Associated Gene:

Gene:

STX2

Ensembl Gene ID:

ENSAPLG00000016913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048139

1769411 - 1786818

17408

ENSAPLT00000047125

1769411 - 1786818

17408