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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1777112_1777904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1777112 - 1777904

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TATTTGCTATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

TATTCTTGTATT

Flanking Amino Acid:

IANKIRARLKAIEQTFDQGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

38.1

Major BPS

70.2

0.5

72.1

Major PPT

72.3

0.5

0.9

71.6

39.1

Minor 5ss

39.1

-1.2

2.8

40.9

45.4

Minor BPS

57.4

0.31

1.8

77.76

Associated Gene:

Gene:

STX2

Ensembl Gene ID:

ENSAPLG00000016913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048139

1769411 - 1786818

17408

ENSAPLT00000047125

1769411 - 1786818

17408