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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1777980_1779466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1777980 - 1779466

Intron Length:

1487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

ATTTTTTTTAAG

Flanking Amino Acid:

IILSAPNPEGRTKEELEELN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

0.72

80.3

31.7

Major PPT

82.1

0.72

87.2

30.4

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

51.7

-0

1.8

62.12

40.2

Associated Gene:

Gene:

STX2

Ensembl Gene ID:

ENSAPLG00000016913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047125

1769411 - 1786818

17408

ENSAPLT00000048139

1769411 - 1786818

17408