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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1779567_1780376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1779567 - 1780376

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTTTTTT

5'SS Class:

major

3'SS Sequence:

ATTTATCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATATTTTAATT

Flanking Amino Acid:

DHFMDDFFQQVEELRNNIAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

78.5

31.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.2

0.66

0.8

70.9

40.1

Minor 5ss

46.8

-0.3

2.7

66.9

44.3

Minor BPS

64.1

0.52

1.3

72.89

38.6

Associated Gene:

Gene:

STX2

Ensembl Gene ID:

ENSAPLG00000016913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048139

1769411 - 1786818

17408

ENSAPLT00000047125

1769411 - 1786818

17408