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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2393982_2399730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2393982 - 2399730

Intron Length:

5749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTCTCTTTATCC

Flanking Amino Acid:

TKWNKRNLSWRVRTFPKESH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.5

37.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

85.3

0.79

0.6

84.5

23.4

Minor 5ss

31.7

-2.1

3.6

47.8

47.9

Minor BPS

63.3

0.4

1.6

69.42

42.8

Associated Gene:

Gene:

MMP17

Ensembl Gene ID:

ENSAPLG00000014494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015126

2392403 - 2411524

19122

ENSAPLT00000038004

2392403 - 2411524

19122