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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2400015_2401351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2400015 - 2401351

Intron Length:

1337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATGTCTTTATTT

Flanking Amino Acid:

DDEYWTFRSSDAHGMDLFAV

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

34.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

88.7

0.87

0.7

81.1

35.5

Minor 5ss

40.4

-1.1

2.9

53.8

43.4

Minor BPS

0.55

1.5

77.76

39.5

Associated Gene:

Gene:

MMP17

Ensembl Gene ID:

ENSAPLG00000014494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015126

2392403 - 2411524

19122

ENSAPLT00000038004

2392403 - 2411524

19122