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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2401529_2401661_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2401529 - 2401661

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTACACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

TTGTCTTTACAC

Flanking Amino Acid:

EDKVRIWQLYGVRESVSPTA

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

79.1

37.5

Major BPS

72.8

0.57

30.3

Major PPT

70.9

0.47

0.9

66.4

33.7

Minor 5ss

44.3

-0.6

2.8

59.1

45.3

Minor BPS

60.6

0.31

1.7

71.11

40.5

Associated Gene:

Gene:

MMP17

Ensembl Gene ID:

ENSAPLG00000014494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038004

2392403 - 2411524

19122

ENSAPLT00000015126

2392403 - 2411524

19122