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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2401762_2404305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2401762 - 2404305

Intron Length:

2544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TGTCTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCCCGCTCACCC

Flanking Amino Acid:

PELPENRSTVPLRRDVPNRC

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.4

47.6

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

80.7

0.69

0.9

76.5

37.5

Minor 5ss

39.7

-1.2

42.3

Minor BPS

39.7

-0.8

2.1

43.27

44.5

Associated Gene:

Gene:

MMP17

Ensembl Gene ID:

ENSAPLG00000014494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038004

2392403 - 2411524

19122

ENSAPLT00000015126

2392403 - 2411524

19122