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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2404389_2407553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2404389 - 2407553

Intron Length:

3165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

GGGTCAGTAATG

Flanking Amino Acid:

QIRGEAFFFKGKYFWRLTRN

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

79.4

0.66

0.8

70.1

36.5

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

44.8

-0.5

2.2

49.99

Associated Gene:

Gene:

MMP17

Ensembl Gene ID:

ENSAPLG00000014494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038004

2392403 - 2411524

19122

ENSAPLT00000015126

2392403 - 2411524

19122