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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2407707_2409360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2407707 - 2409360

Intron Length:

1654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

GTGAAACTAACG

Flanking Amino Acid:

TSDHKIVFFKGDRYWVFKDN

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

0.45

0.9

67.6

25.3

Major PPT

85.2

0.79

0.7

84.2

23.7

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

42.1

-0.7

2.1

48.52

43.8

Associated Gene:

Gene:

MMP17

Ensembl Gene ID:

ENSAPLG00000014494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038004

2392403 - 2411524

19122

ENSAPLT00000015126

2392403 - 2411524

19122