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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2410750_2410881_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2410750 - 2410881

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGCTCC

5'SS Class:

weak_major

3'SS Sequence:

TCTCACCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

AGCCCTATGACA

Flanking Amino Acid:

DESRSENGYEGRQRCSAPGT

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.3

59.4

40.8

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

72.4

0.5

0.8

65.2

30.3

Minor 5ss

46.6

-0.3

2.5

60.5

44.2

Minor BPS

48.2

-0.1

1.6

55.88

36.5

Associated Gene:

Gene:

MMP17

Ensembl Gene ID:

ENSAPLG00000014494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015126

2392403 - 2411524

19122