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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2455184_2458180_F


Intron Information:

Intron Rank:
7

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
2455184 - 2458180

Intron Length:
2997

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGTGTG

5'SS Class:
strong_major

3'SS Sequence:
CTCTCCCAAAAAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TTATAAA

U12 Branch Point Sequence:
TCTTTTATAAAA

Flanking Amino Acid:
ATLCGSPMYMAPEVIMSQHY

Intron Amino Acid Position:
184

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.1
0.9
0.9
77.9
36.8

Major BPS
78.6
0.71
1
78.6
31

Major PPT
55.6
0.13
1.1
57.1
31.3

Minor 5ss
36.4
-1.5
3.3
46.1
43.6

Minor BPS
55.9
0.18
1.7
68.75
37.7

Associated Gene:

Gene:
ULK1

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2432092 - 2511157
79066