About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_2465919_2484128_F

Intron Information:

Intron Rank:
9
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
2465919 - 2484128
Intron Length:
18210

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAA|GTAAGCATT
5'SS Class:
strong_major
3'SS Sequence:
GCCATTTTTTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTCTAAC
U12 Branch Point Sequence:
CAGACTCTAACA
Flanking Amino Acid:
FYEKNKMLMPKSSLLTSAGL
Intron Amino Acid Position:
237

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83
0.78
0.9
84.6
33.2
Major BPS
72.3
0.55
1
73.3
28.9
Major PPT
79.1
0.66
0.9
76
37.8
Minor 5ss
47
-0.3
2.9
67.1
37.8
Minor BPS
49.5
-0
1.7
57.82
41.6

Associated Gene:

Gene:
ULK1
Ensembl Gene ID:
ENSAPLG00000014729
Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015450
2432092 - 2511157
79066