About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_2501468_2508622_F

Intron Information:

Intron Rank:
18
Intron Class:
major-like
Intron Phase:
1
Intron Coordinates:
2501468 - 2508622
Intron Length:
7155

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TCA|GTGATACAG
5'SS Class:
weak_major
3'SS Sequence:
CAGAGATTGGGAG|G
3'SS Class:
degenerate_major
U2 Branch Point Sequence:
TACTCAT
U12 Branch Point Sequence:
AGTTACTCATTT
Flanking Amino Acid:
CLLHALRESVSTGRTRRMSN
Intron Amino Acid Position:
621

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
54.6
0.11
1.1
45.5
38.2
Major BPS
87.1
0.92
0.7
85.9
22.5
Major PPT
42.8
-0.4
1.7
39.1
43.4
Minor 5ss
28.1
-2.5
3
36.1
41.4
Minor BPS
48.3
-0
1.9
68.82
41.9

Associated Gene:

Gene:
ULK1
Ensembl Gene ID:
ENSAPLG00000014729
Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015450
2432092 - 2511157
79066