About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_2508832_2509047_F


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2508832 - 2509047

Intron Length:
216

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAATGACC

5'SS Class:
major

3'SS Sequence:
GTGTTGCCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTGTAT

U12 Branch Point Sequence:
ACCTTCTGTATG

Flanking Amino Acid:
KLIFSYAVQMVQSAALDEMF

Intron Amino Acid Position:
691

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.2
0.52
1.1
65.1
38.8

Major BPS
58.9
0.22
1.5
59.6
46.8

Major PPT
73.5
0.53
1
66.3
40.8

Minor 5ss
33.7
-1.9
3.1
41.5
39.1

Minor BPS
44.9
-0.5
1.8
45.32
41.9

Associated Gene:

Gene:
ULK1

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2432092 - 2511157
79066