Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_2531691_2532607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2531691 - 2532607

Intron Length:

917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATTTCTTTATTT

Flanking Amino Acid:

LSALKRDLWKHTDLSLFDVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.9

44.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

78.8

0.65

83.6

31.8

Minor 5ss

34.1

-1.8

2.9

42.6

44.2

Minor BPS

71.8

0.76

1.5

85.98

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043593

2531556 - 2544216

12661

ENSAPLT00000031006

2531556 - 2544791

13236