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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2534247_2534761_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2534247 - 2534761

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGCAGT

5'SS Class:

major

3'SS Sequence:

TTTGTCTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTGTCTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

70.5

41.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.4

0.71

0.9

77.5

35.6

Minor 5ss

41.7

-0.9

2.8

57.4

46.9

Minor BPS

0.97

1.2

86.69

32.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019450

2534077 - 2544860

10784