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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2537106_2538100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2537106 - 2538100

Intron Length:

995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GAATTTGTAATT

Flanking Amino Acid:

KTDAHSWHYLESIKSFNQDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.2

0.52

0.9

70.2

35.1

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

49.3

0.02

1.9

65.91

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043593

2531556 - 2544216

12661

ENSAPLT00000031006

2531556 - 2544791

13236

ENSAPLT00000019450

2534077 - 2544860

10784

ENSAPLT00000046626

2535813 - 2544860

9048