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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2554461_2555686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2554461 - 2555686

Intron Length:

1226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTACTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCCTTTTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.9

0.81

0.7

81.6

29.9

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

72.7

0.8

1.6

89.79

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029291

2554373 - 2593730

39358