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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2556642_2557394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2556642 - 2557394

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTATAT

U12 Branch Point Sequence:

TTCTCTGTAACT

Flanking Amino Acid:

QDKLAEQVKLENQIHQRIAE

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

57.9

0.2

1.1

40.4

Major PPT

78.8

0.65

83.1

32.3

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

0.64

87.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027716

2554373 - 2593730

39358

ENSAPLT00000016453

2554373 - 2593730

39358

ENSAPLT00000043508

2554373 - 2593730

39358

ENSAPLT00000029291

2554373 - 2593730

39358