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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2559813_2560307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2559813 - 2560307

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TATTGAATGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATATTTTAATT

Flanking Amino Acid:

DLLLEKESEMGSSSSGRKRK

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

60.2

0.23

1.1

52.7

45.8

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

66.6

0.6

1.2

75.73

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027716

2554373 - 2593730

39358

ENSAPLT00000016453

2554373 - 2593730

39358

ENSAPLT00000043508

2554373 - 2593730

39358

ENSAPLT00000029291

2554373 - 2593730

39358