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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2563793_2564365_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2563793 - 2564365

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAACTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTATTTTTAACT

Flanking Amino Acid:

AFFAHLACNEGNWGPHLVVV

Intron Amino Acid Position:

613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

87.3

0.93

0.8

36.5

Major PPT

80.6

0.69

0.8

75.9

32.8

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

76.1

0.9

1.1

83.9

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029291

2554373 - 2593730

39358

ENSAPLT00000027716

2554373 - 2593730

39358

ENSAPLT00000016453

2554373 - 2593730

39358

ENSAPLT00000043508

2554373 - 2593730

39358