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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2569029_2570846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2569029 - 2570846

Intron Length:

1818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATG

Flanking Amino Acid:

SPIATVSSNQGGEVVKIAQL

Intron Amino Acid Position:

989

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

76.9

0.6

0.8

72.6

30.7

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

83.3

0.91

1.1

82.74

31.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043508

2554373 - 2593730

39358