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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2576076_2576480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2576076 - 2576480

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGCTT

5'SS Class:

major

3'SS Sequence:

CCTCCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGTTTCTGAAAC

Flanking Amino Acid:

IGRCKDIHIYRLVSGNSVEE

Intron Amino Acid Position:

1495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

71.4

39.9

Major BPS

82.1

0.8

71.6

36.4

Major PPT

81.5

0.71

0.7

25.3

Minor 5ss

31.3

-2.1

3.5

47.3

48.1

Minor BPS

0.42

1.5

73.4

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027716

2554373 - 2593730

39358

ENSAPLT00000016453

2554373 - 2593730

39358

ENSAPLT00000043508

2554373 - 2593730

39358

ENSAPLT00000029291

2554373 - 2593730

39358