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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2587545_2588122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2587545 - 2588122

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTAATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GTTTTTGTAATT

Flanking Amino Acid:

VAIGQPQKAAGGQTVVAQPL

Intron Amino Acid Position:

2378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

75.9

35.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.2

0.7

0.9

40.1

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

59.2

0.37

79.54

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029291

2554373 - 2593730

39358

ENSAPLT00000027716

2554373 - 2593730

39358

ENSAPLT00000016453

2554373 - 2593730

39358

ENSAPLT00000043508

2554373 - 2593730

39358