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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2594210_2594293_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2594210 - 2594293

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCAGGTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

GAGCCCCCAGCC

Flanking Amino Acid:

RLPAEEAALAGSAEEKYRVW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

47.1

-0.1

1.7

50.2

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

41.1

-0.7

1.9

47.68

40.8

Associated Gene:

Gene:

NOC4L

Ensembl Gene ID:

ENSAPLG00000001340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001526

2593862 - 2604627

10766