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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2598256_2599688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2598256 - 2599688

Intron Length:

1433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTTTTGAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAC

U12 Branch Point Sequence:

GGCACGTTCACT

Flanking Amino Acid:

IDLVKFMVKQAMCCCCSWSS

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

0.32

1.7

76.7

37.4

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

44.8

-0.3

2.4

62.03

47.3

Associated Gene:

Gene:

NOC4L

Ensembl Gene ID:

ENSAPLG00000001340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001526

2593862 - 2604627

10766