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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2712956_2713189_R

Intron Information:

Intron Rank:

133901

Intron Class:

major

Intron Phase:

Intron Coordinates:

2712956 - 2713189

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAG

U12 Branch Point Sequence:

AATAGGTTAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

47.4

-0.1

1.6

49.1

44.8

Major PPT

84.2

0.77

0.8

81.2

36.5

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

42.8

-0.4

2.5

64.43

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035361

2701649 - 2713798

12150

ENSAPLT00000029167

2694930 - 2713798

18869