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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2807837_2816504_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2807837 - 2816504

Intron Length:

8668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

TCGTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

AATAACTGACTT

Flanking Amino Acid:

LDKGDESAPIRTPAMIGCSF

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

70.1

0.5

70.3

31.9

Major PPT

83.3

0.75

0.8

80.8

31.2

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

45.5

-0.2

1.9

62.69

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042909

2805244 - 2879049

73806