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Intron Name: Anas_platyrhynchos_platyrhynchos_16_2830904_2852826_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2830904 - 2852826

Intron Length:

21923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGGATTTTAATT

Flanking Amino Acid:

DRSIPDYRPKKCKQMTYPDD

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

63.5

0.5

1.3

72.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042909

2805244 - 2879049

73806