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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3081795_3082808_R

Intron Information:

Intron Rank:

140528

Intron Class:

major

Intron Phase:

Intron Coordinates:

3081795 - 3082808

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

85.2

32.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.7

0.69

0.9

74.4

39.6

Minor 5ss

42.3

-0.9

3.5

64.1

47.4

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025594

3080740 - 3083072

2333