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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3302977_3303792_R

Intron Information:

Intron Rank:

141053

Intron Class:

major

Intron Phase:

Intron Coordinates:

3302977 - 3303792

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATTACA

5'SS Class:

major

3'SS Sequence:

TTCCTTGTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGCTAC

U12 Branch Point Sequence:

TTTTCCTTGTCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

73.5

37.2

Major BPS

43.5

-0.4

1.4

35.9

42.7

Major PPT

79.2

0.66

0.8

37.9

Minor 5ss

35.6

-1.6

2.6

35.7

40.5

Minor BPS

56.1

0.17

3.5

85.91

32.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034278

3301379 - 3319135

17757

ENSAPLT00000037081

3301379 - 3310275

8897