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Intron Name: Anas_platyrhynchos_platyrhynchos_16_33777_35556_F

Intron Information:

Intron Rank:

125910

Intron Class:

major

Intron Phase:

Intron Coordinates:

33777 - 35556

Intron Length:

1780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

AGCTTCTGAGGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

82.4

0.73

0.9

81.2

36.5

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

-0.3

1.9

59.48

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048134

32446 - 36231

3786