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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3893266_3893425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3893266 - 3893425

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCACTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGATAT

U12 Branch Point Sequence:

TCCCCCCTCACT

Flanking Amino Acid:

TKQDATQETVEANVENQCHV

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

56.3

0.16

1.2

42.8

Major PPT

68.2

0.41

0.8

62.2

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

49.2

0.02

2.1

69.96

46.6

Associated Gene:

Gene:

CHFR

Ensembl Gene ID:

ENSAPLG00000002931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002996

3883762 - 3904319

20558