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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3893636_3894586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3893636 - 3894586

Intron Length:

951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTGTTTTTATTT

Flanking Amino Acid:

ASEQDNPSTSGSQSSVFTPV

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

57.8

0.32

1.6

71.48

40.5

Associated Gene:

Gene:

CHFR

Ensembl Gene ID:

ENSAPLG00000002931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002996

3883762 - 3904319

20558