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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3894803_3895363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3894803 - 3895363

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCTAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

GTTTCAAGAAAA

Flanking Amino Acid:

LEPAKKKLKEDEDSCPNVPA

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

1.1

84.1

Major BPS

0.57

1.2

77.7

37.1

Major PPT

78.5

0.64

0.8

73.2

31.7

Minor 5ss

25.3

-2.8

3.5

41.4

Minor BPS

46.8

-0.2

65.51

39.5

Associated Gene:

Gene:

CHFR

Ensembl Gene ID:

ENSAPLG00000002931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002996

3883762 - 3904319

20558