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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3895965_3896558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3895965 - 3896558

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCTTGAACT

Flanking Amino Acid:

LVEAYLIQHPDKCRNEDDVR

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.8

76.1

39.3

Major BPS

100

1.24

0.5

100

Major PPT

76.1

0.59

70.3

40.4

Minor 5ss

29.2

-2.4

3.8

40.8

45.4

Minor BPS

82.9

1.11

1.2

96.98

27.3

Associated Gene:

Gene:

CHFR

Ensembl Gene ID:

ENSAPLG00000002931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002996

3883762 - 3904319

20558