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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3897736_3898143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3897736 - 3898143

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGTC

5'SS Class:

major

3'SS Sequence:

TCCATCCATCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCTTTTTCCATC

Flanking Amino Acid:

APSTSANFPAAVQEYVCPAQ

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

72.1

39.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.38

0.9

58.8

37.3

Minor 5ss

32.2

-2

3.4

43.7

44.1

Minor BPS

47.6

-0.2

1.9

61.08

39.5

Associated Gene:

Gene:

CHFR

Ensembl Gene ID:

ENSAPLG00000002931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002996

3883762 - 3904319

20558