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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3898264_3898594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3898264 - 3898594

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTGTG

5'SS Class:

major

3'SS Sequence:

TGTTATCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TCTTTGTTATCT

Flanking Amino Acid:

EQNPHVAPQQCTVCLQPFCH

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

70.9

39.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.5

0.75

0.9

76.8

37.1

Minor 5ss

44.8

-0.6

3.1

61.8

43.3

Minor BPS

54.4

0.22

2.3

78.81

43.9

Associated Gene:

Gene:

CHFR

Ensembl Gene ID:

ENSAPLG00000002931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002996

3883762 - 3904319

20558