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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3900516_3900690_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3900516 - 3900690

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

GATTTCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATTAT

U12 Branch Point Sequence:

TTACACTGACAT

Flanking Amino Acid:

ALQRGVFMLSDYRITGNTVL

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

26.2

Major BPS

63.3

0.33

1.1

41.2

Major PPT

75.1

0.57

0.9

66.3

40.4

Minor 5ss

45.6

-0.5

2.5

57.6

47.1

Minor BPS

45.3

-0.2

1.9

66.25

43.2

Associated Gene:

Gene:

CHFR

Ensembl Gene ID:

ENSAPLG00000002931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002996

3883762 - 3904319

20558