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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3902019_3904276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3902019 - 3904276

Intron Length:

2258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCATTTTAATA

Flanking Amino Acid:

CRTQVKAHHAMKFNHICEQT

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.1

24.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

93.1

0.97

0.7

92.3

26.6

Minor 5ss

44.3

-0.6

2.9

62.8

Minor BPS

60.8

0.33

1.3

63.8

37.1

Associated Gene:

Gene:

CHFR

Ensembl Gene ID:

ENSAPLG00000002931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002996

3883762 - 3904319

20558