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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3926282_3943574_R

Intron Information:

Intron Rank:

133500

Intron Class:

major

Intron Phase:

Intron Coordinates:

3926282 - 3943574

Intron Length:

17293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCCC

5'SS Class:

major

3'SS Sequence:

TTTAATTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATTTGTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

63.8

40.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

81.1

0.7

0.9

73.2

41.6

Minor 5ss

31.4

-2.1

3.3

42.6

44.4

Minor BPS

70.3

0.72

1.7

85.82

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043705

3912739 - 3943652

30914